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from distutils.core import setup
from distutils.extension import Extension
from Cython.Build import cythonize
import numpy
all_extensions = Extension(
"*",
["pyisda/*.pyx"],
include_dirs=["c_layer", numpy.get_include()],
libraries=["cds", "farmhash", "lz4"],
language="c++",
extra_compile_args=["-fopenmp"],
extra_link_args=["-fopenmp", "-Wl,--strip-all"],
)
c_extension = Extension(
"pyisda.optim",
include_dirs=["c_layer", numpy.get_include()],
sources=["pyisda/optim.pyx", "c_layer/cdsbootstrap.c"],
libraries=["cds"],
language="c++",
)
all_extensions = cythonize(
[c_extension, all_extensions],
nthreads=4,
compiler_directives={"embedsignature": True,
"language_level": 3,
"c_string_type": "unicode",
"c_string_encoding": "ascii"},
)
setup(
name="pyisda",
version="0.3",
author="Guillaume Horel",
ext_modules=all_extensions,
packages=["pyisda"],
)
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