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from distutils.core import setup
from distutils.extension import Extension
from Cython.Build import cythonize
import numpy
all_extensions = Extension("*", ["pyisda/*.pyx"],
include_dirs=['c_layer', numpy.get_include()],
libraries=["cds", "farmhash"],
language='c++',
extra_compile_args=['-fopenmp'],
extra_link_args=['-fopenmp', '-Wl,--strip-all'])
c_extension = Extension("pyisda.optim",
include_dirs=['c_layer', numpy.get_include()],
sources=['pyisda/optim.pyx', 'c_layer/cdsbootstrap.c'],
libraries=['cds'],
language='c++')
all_extensions = cythonize([c_extension, all_extensions], nthreads=4,
compiler_directives={'embedsignature': True})
setup(
name="pyisda",
version='0.1',
author='Guillaume Horel',
ext_modules=all_extensions,
packages=['pyisda'])
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