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Diffstat (limited to 'experiments/README.txt')
| -rw-r--r-- | experiments/README.txt | 9 |
1 files changed, 8 insertions, 1 deletions
diff --git a/experiments/README.txt b/experiments/README.txt index a3f2e22..80f6aa0 100644 --- a/experiments/README.txt +++ b/experiments/README.txt @@ -16,7 +16,7 @@ Description of the files (time component) and delta (structural component). The likelihood (and a few other things) for each of the values is printed in the file "out.log". Takes as argument the name of .pickle file computed by build_network.py - Prints columns as alpha, delta, beta, #roots, likelihood + Prints columns as alpha, delta, beta, number of roots, likelihood * plot3d.py: code to obtain a 3d plot of the log likelihood as a function of alpha and delta. Can also be easily modified to obtain 2d plots along @@ -38,3 +38,10 @@ complicated, it is also possible to compile .pyx files using python distutils (which I would assume is more standard on MacOS). This only requires distutils and a simple setup.py file. More details here: http://docs.cython.org/src/reference/compilation.html#configuring-the-c-build + +Running Code +============ +python build_network.py ../../Results/dag_dat_all.csv +python setup.py build_ext --inplace +python process.py ../../Results/dag_dat_all.pickle +python plot3d.py |