| Age | Commit message (Collapse) | Author | |
|---|---|---|---|
| 2015-09-14 | Import supplements and repo reorganization | Thibaut Horel | |
| 2015-08-01 | minor updates | Ben Green | |
| 2015-07-14 | a few experiments | Ben Green | |
| 2015-07-08 | updated temporal model for different time scales, ran some tests | Ben Green | |
| 2015-07-02 | just some minor tests with ml | Ben Green | |
| 2015-07-02 | in which the model works!! | Ben Green | |
| 2015-07-01 | Got predict-victims running in parallel, drastically reducing the time | Ben Green | |
| for each test. Also changed how we get the rankings of infected individuals each day. | |||
| 2015-06-28 | Worked on synthetic data recovery so we can tell how high the actual | Ben Green | |
| infector is ranked among all potential parents. Cleaned up code for the predicting victims benchmarking test. | |||
| 2015-06-25 | Worked on process to generate cascades in R, recover them in ml2, and | Ben Green | |
| compare true/recovered. Results look good: ml2 finds close-to-actual parameters and gets ~60% of the infectors right. I will check how many recovery gets in the top 2 or 3 infectors. | |||
| 2015-06-25 | Tried ml3 that allows for multiple parents to infect. | Ben Green | |
| 2015-06-25 | playing around with ml3 | Ben Green | |
| 2015-06-23 | ran some experiments with ml3, still no good results | Ben Green | |
| 2015-06-23 | updated calculation of structural component with edge weights, and to | Ben Green | |
| penalize less for longer distances | |||
| 2015-06-22 | Added ml3, where we don’t consider edges from victims to non-victims. | Ben Green | |
| Also playing around with only allowing most likely parent to try and infect. Still working to see if some variant produces good results that allow us to determine seeds/non-seeds. | |||
| 2015-06-20 | altered weight_success to show dist and dt between each parent and child | Ben Green | |
| 2015-06-20 | More tests with ml2 to find optimal results | Ben Green | |
| 2015-06-20 | added new model, ml2, which assumes all victims are infected by someone | Ben Green | |
| else (unless they are root victims) | |||
| 2015-06-20 | tried generating cascades and recovering parameters, still got the same | Ben Green | |
| result where optimization minimizes alpha, delta as much as possible | |||
| 2015-06-19 | Continuing to experiment. Identifying infections vs seeds might be | Ben Green | |
| impossible :/. We may want to try a model where we just assume infections — can get parameters for the benchmark test. | |||
| 2015-06-18 | testing new model, realizing we may be getting optimal beta wrong | Ben Green | |
| 2015-06-18 | altered spawning model and changed temporal probability on | Ben Green | |
| weight_success | |||
| 2015-06-16 | Changed model for spawning. Began fixing underflow error in | Ben Green | |
| prob_success/failure | |||
| 2015-06-15 | minor changes for testing | Ben Green | |
| 2015-06-11 | started adding weights into edge probabilities | Ben Green | |
| 2015-06-11 | cleaned up code with some minor changes | Ben Green | |
| 2015-06-08 | Ben’s first commit after getting code working! | Ben Green | |
| 2015-06-07 | Project cleanup before handing it to Ben | Thibaut Horel | |
| 2015-04-06 | Updated model, still getting weird results though | Thibaut Horel | |
| 2015-03-30 | New version of the model | Thibaut Horel | |
